PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50417.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 320aa    MW: 35232.5 Da    PI: 6.8495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.4e-06194222331
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkas 31 
                  +h+ +Er RR++i +++  L+ l+P +s
  PKA50417.1 194 NSHSLAERVRREKISERMRVLQNLVPGCS 222
                 58************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MATPRSSANV NEEFFLTDWN ALISSDKILE ISGSSNLSSY NARSLPSNDS MGEKIMRPCF  60
NNQSFPDEME SSFDLSAACQ IHVSLSHSDF TLTNSCCIER KHKGKKRKTV SESGRVLPQS  120
PSPKNAEGKE QSNVSPESSK SSREREEMKQ IAEVSPGLSS SKSAAKQAQL ISHDSDALKE  180
EYIHIRAKRG QATNSHSLAE RVRREKISER MRVLQNLVPG CSKFLSMKLA AVNPELNFDN  240
PHIFPKDINV LGEAANPGRA PEFKTPNPHL HGVGQIEPEI LMATAIHQLC SMAQTPNVWD  300
EELQSAVQMG FIPQSPSSDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-30bHLH family protein