PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50499.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 257aa MW: 28378.9 Da PI: 9.5983

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.7e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+e+AtPk +l++m+v+gLt++hvkSHLQkYRl PKA50499.1 18 RQRLRWTNELHERFVDAVSQLGGPERATPKGVLRIMGVQGLTIYHVKSHLQKYRL 72 58****************************************************8 PP
2	Myb_DNA-binding	62.7	7.3e-20	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav qlGg+ t+k + r mg +g+t +++ks++qky+ PKA50499.1 20 RLRWTNELHERFVDAVSQLGGPeraTPKGVLRIMGvQGLTIYHVKSHLQKYR 71 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MAQHAGGSNP NNPNASSRQR LRWTNELHER FVDAVSQLGG PERATPKGVL RIMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSS SEGAKVEKKE SGDVLSNIDN STGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGGLAPIST GQFPEDKADP STPAPITESS 180 LQGKNKGNLF KSLSFEDSHH APATPESGSL STSPKHERPV KRLRDVDSPK QEDLMLGHHI 240 LESSSSSLFL GSASFSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-82	G2-like family protein