PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50534.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 278aa MW: 32076 Da PI: 5.4827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.2e-52	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yL++k+++++l++ +i+evd+yk++Pw+Lp k+ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v k + + PKA50534.1 13 LPPGFRFHPTDEELVVHYLCRKASHQRLPV-PIIAEVDLYKFHPWELPDKALFGQREWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVSPKgSCR 110 79**************************.88***********7777899**********************************985556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+ap+g ktdW+mheyrl PKA50534.1 111 PLGIKKALVFYSGKAPRGAKTDWIMHEYRL 140 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MGRTRDAEEE LNLPPGFRFH PTDEELVVHY LCRKASHQRL PVPIIAEVDL YKFHPWELPD 60 KALFGQREWY FFTPRDRKYP NGSRPNRAAG RGYWKATGAD KPVSPKGSCR PLGIKKALVF 120 YSGKAPRGAK TDWIMHEYRL ADSNRSPSKK VGSLRLDEWV LCRLYNKKNA WEKTKPNPKE 180 STSSFEGTLD GSSAEDTSES FRTPESEVDD SFPELQQPKL EPYDPFPEMH QLIKEEDNDW 240 FMDLNLEELE ALETATAMPT MFDSSLNQDY FFQALCSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	9e-91	NAC family protein