PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50552.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 291aa    MW: 32458.4 Da    PI: 8.5641
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.32.8e-17168229359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 
                 Dg++WrKYG K++ +s+fp+ YY+C+s    gC ++k +++++  +dp   +++Y+ +H+++
  PKA50552.1 168 DGHQWRKYGEKHISKSQFPKTYYKCSSFkeqGCLATKTIQQKDgsHDPASYVVKYNFHHTCK 229
                 9************************9866779********9853379************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEVGGSAPLP CHHEMVVGEI TRSCQLVEKL RSIVLPPRGG EASRWPELQL VGDLFDEVLQ  60
SYRVSVSMLL HPCSCLNAGE PAVHTGSEWS RAADEAKSGE ERPERTRKIN YATDSRKELV  120
QKSGATPTLM HSNGHQWLKP GKRNTTNVDI ARGETNSWTT ITEAPHFDGH QWRKYGEKHI  180
SKSQFPKTYY KCSSFKEQGC LATKTIQQKD GSHDPASYVV KYNFHHTCKP IKSNYSQHAE  240
NTSQQGSLLD LFPNNTASTI TSPRRKPSDQ CSSSSASSML IDLNLTIQFR G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-14WRKY family protein