PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50555.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 248aa    MW: 28097.4 Da    PI: 5.3759
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY696.9e-2287147258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEE.E-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkve.rsaedpkvveitYegeHnh 58 
                  Dgy+WrKYGqK++++s++prsYYrC+++   +C++ k+v+ +++e+p+v +++Y+ +H++
  PKA50555.1  87 GDGYRWRKYGQKKIHNSNHPRSYYRCAYRedmNCKAMKQVQlKDSEEPHVYTVIYTWHHTC 147
                 5***************************99999********4556899***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MASVEKKELS LIKSVEGAIK ELDRGHELAL SLLHLLSAAS AHGDRELEAE RRDLAKQVLS  60
AFSVAVSHLK YCRTRREADQ AASTPHGDGY RWRKYGQKKI HNSNHPRSYY RCAYREDMNC  120
KAMKQVQLKD SEEPHVYTVI YTWHHTCGTM LEAFPELEIS PSSARDTFLI SFESNPEDTA  180
KLNPMFSSSS TLSRSGGLRT DDDEQVYSSS SLPVVVADHG MGEEKDLLEF EFDTDELDQC  240
LSWFESLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.12e-18WRKY family protein