PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50595.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 199aa    MW: 21537.4 Da    PI: 9.3339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.4e-1070110954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  PKA50595.1  70 ARERRHRISDRFKILKSLVPGG-----SKMDTVSMLEEAIHYVKFL 110
                 699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MENFQDYYFG QQTSFFTTPD PLPPRHQQKG RRRANACAAG GNVSAGSGSG SGGGGVGGMR  60
LSTDPQSVAA RERRHRISDR FKILKSLVPG GSKMDTVSML EEAIHYVKFL KAQIWLHQAA  120
MKLHGHEVKT SAPYNILSAP PPSSSSSSSP PPAAAAHGMM MMYDQYSMVV PPTPYLPNMA  180
FLSFQEDEPM AAADHGFSF