PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50643.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 206aa    MW: 21903.8 Da    PI: 9.9869
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-202272256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +++GVr ++ +gr++AeIrdp++   + r++lg+f+tae+Aa+a++ a+++l+g+
  PKA50643.1 22 RFRGVRKRP-WGRYAAEIRDPVK---KSRIWLGTFDTAEDAARAYDSAALALRGA 72
                69*******.**********654...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MALRKGRSLA ADAQAAPGGE ARFRGVRKRP WGRYAAEIRD PVKKSRIWLG TFDTAEDAAR  60
AYDSAALALR GAKAKINFPP VPPHASTAGG GSLPIPFFQH QVPLPPPSRP TSSSLSSTVE  120
SFSGPRRLTG GSSSIRLRPL RPLRQPAIPA PPRVLSGDQD CHSDCGSSSS VIDDGDVASA  180
CYQALPFDLN LVPLPDDDLQ CTVLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-20ERF family protein