PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50670.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bZIP

Protein Properties

Length: 340aa MW: 36871.8 Da PI: 4.7938

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.7	1.9e-16	170	222	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +lkr rrk +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l e +++ PKA50670.1 170 DLKRMRRKVSNRESARRSRRRKQAHLADLEQQVDQLRGENASLYKQLTEANQQ 222 69*****************************************9666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MKRSASDWDL EELLRPVELP APSPGGGECR NQSSTIDEFL INRASEKENG AAGDPAGSFC 60 FKGPLSLLVS SQSPAEDKQC RPRARIAILM NDDGLDGGLD EAHRSIAPLL SSISSTIESQ 120 SFCAGSPTSS LKPKSIENQA LGGSSGSDQS DEESFEIEAG PCEQSTDTID LKRMRRKVSN 180 RESARRSRRR KQAHLADLEQ QVDQLRGENA SLYKQLTEAN QQFTDSVTDN RILKSDVEAL 240 RVKVKMAENM VARGSLTCSL DHLLQSPISS SHLLGSLPNF DLQTKAASYL DAPLAGLANN 300 TGDAAAEEVE TKNGDIRTSV HNLQNRISDD IANFSTQIWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	191	RRKVSNRESARRSRRRK
2	185	192	RRSRRRKQ
3	187	192	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	8e-35	bZIP family protein