PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50711.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family G2-like
Protein Properties Length: 219aa    MW: 24308.7 Da    PI: 9.1192
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.14.2e-331971355
     G2-like  3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                rlrWt++LH+rFv+av+qLGG+ekAtPk+++++m+v+gLtl+h+kSHLQkYRl
  PKA50711.1 19 RLRWTQQLHQRFVDAVTQLGGIEKATPKSVMQVMGVPGLTLYHLKSHLQKYRL 71
                9***************************************************8 PP
2Myb_DNA-binding64.61.8e-201970148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+++++++vdav+qlGg    t+k++++ mg  g+tl+++ks++qky+
       PKA50711.1 19 RLRWTQQLHQRFVDAVTQLGGIekaTPKSVMQVMGvPGLTLYHLKSHLQKYR 70
                     89******************88*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MSNQAKLHDL VVSVDARLRL RWTQQLHQRF VDAVTQLGGI EKATPKSVMQ VMGVPGLTLY  60
HLKSHLQKYR LSKNRHLRAT NDDPKQGFSQ VQKHLQLRIE AQGKYLMSVL SKAKETLIGH  120
SSNSLDMEAA MAELSELVSG VETERGEMAF DSKRAQNADC SMDSCLTSEM SEPKEKDAGR  180
NKLESSSSSL NAGIAGDKRP VMGLSLKSRA DAQEIDLNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.32e-50G2-like family protein