PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50719.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 375aa MW: 42237.8 Da PI: 6.978

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yL++k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PKA50719.1 14 MLPGFRFHPTDEELVGFYLRRKIQQKPLSI-ELIRQLDIYKYDPWDLPKLAASGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGTK 111 579*************************.89***********8888899***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg ktdW+mhe+rl PKA50719.1 112 CIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MDEKNEMDKV DEVMLPGFRF HPTDEELVGF YLRRKIQQKP LSIELIRQLD IYKYDPWDLP 60 KLAASGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPTFNDPSIS KQRTLDKNSI PANEAWAICR IFKKTNTSAQ 180 RALSHSWISS LPEALEFDKF SLPRAMNGTQ FGSESISCTT EIGSAAQFGC SSGIEQHPSL 240 INCKSSEMAA SFMFSPTEAS MLLNLSPALL QDVEKPSPNI DFGQPHQSNG FTVTFPIETN 300 GSLGSTEEEE DVIGKKNLNS TVIVGSSQWG SLRAMNFPFN LTPNPTDDWK PTLPWDSSLC 360 PSEISTCYST NKCYT

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MDEKNEMDKV DEVMLPGFRF HPTDEELVGF YLRRKIQQKP LSIELIRQLD IYKYDPWDLP  60
KLAASGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPTFNDPSIS KQRTLDKNSI PANEAWAICR IFKKTNTSAQ  180
RALSHSWISS LPEALEFDKF SLPRAMNGTQ FGSESISCTT EIGSAAQFGC SSGIEQHPSL  240
INCKSSEMAA SFMFSPTEAS MLLNLSPALL QDVEKPSPNI DFGQPHQSNG FTVTFPIETN  300
GSLGSTEEEE DVIGKKNLNS TVIVGSSQWG SLRAMNFPFN LTPNPTDDWK PTLPWDSSLC  360
PSEISTCYST NKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-108	NAC family protein