PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50720.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 314aa    MW: 34864.4 Da    PI: 8.2032
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.4e-161360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++ +G g+W++++   g+ R+ k+c++rw +yl
       PKA50720.1 13 KGPWTPEEDIILVTYIQDHGAGNWRSVPTNTGLMRCSKSCRLRWTNYL 60
                     79********************************************97 PP
2Myb_DNA-binding50.74e-1666111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E++l++++ ++lG++ W++Ia++++  Rt++++k++w+++l
       PKA50720.1  66 RGNFTDQEEKLIIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 111
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGRPPCCDKG VKKGPWTPEE DIILVTYIQD HGAGNWRSVP TNTGLMRCSK SCRLRWTNYL  60
RPGIKRGNFT DQEEKLIIHL QALLGNRWAA IASYLPERTD NDIKNYWNTH LKKKLMRKLQ  120
AADDHQAALI SASGRNSYNS ISKGQWERRL QTDIHTAKQA LCEALSLDTK PCPAPPPLPP  180
ANTCNYASST ENIARLLQNW MKKSPKLPRR REISSGSSGS NVCSDTTTES PASAEKKFFA  240
ARAAKVEFRM DSDVTPELSE TSFLQEESKP SSGAPVPAPA LSFFETWLFE DVGNGGVGDL  300
VDLPLSDAPD LFQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.22e-98MYB family protein