PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA50727.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bHLH

Protein Properties

Length: 210aa MW: 23549.6 Da PI: 9.4218

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA50727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	8.1e-05	28	76	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f++L l +a + + Ka++L A + +++L PKA50727.1 28 KIHKAEREKLKRDQLNDLFFQLGYALDSA----RQNNGKASVLSDAARLLRDL 76 567889********************998....56777888888888777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MDTGSKLADK PVNESIPKRK NYCKVPKKIH KAEREKLKRD QLNDLFFQLG YALDSARQNN 60 GKASVLSDAA RLLRDLIAHV GSLRKENSAL LSESQYVTVE KNELQDENGG LQAEIQRLKS 120 ELLRERIDGD PASSSSPSLP PPVFVLPLQQ LEELPSPPVA KPPSSSHVVS RPHARYPTPC 180 DSWPQEFLLS RNQKRPPRTA WREGEDQSLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	9e-32	bHLH family protein