PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50960.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 307aa    MW: 34443.7 Da    PI: 6.2791
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.72.7e-19250292142
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-S CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversa 42 
                 ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v +  
  PKA50960.1 250 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVICLF 292
                 58***************************99*******97665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEVMLMKKTA VAAKADDQRV KGEESGREYT EKAMGAKPVS SGDSSKTSPN EADPNISNKD  60
DQLESTRAKM SEVREENERL KTLLAHIVKE YQSLQMHFFD IKKKDDIEAG KKPIEPSALS  120
HADLDQVDVD QEHELVSLSL GSGSSERKKK KEENEGAVNG IKSAEFSEEL TLGLDCKTEP  180
TAAADEDHKK EQESSLSPEN SSEETNKEEN WPPSRALKTV RRPGDDEPAP QAHVKRARVS  240
VRARCDAPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVIC LFKYIYIYIY  300
IYNIIFV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147152RKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-46WRKY family protein