PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51073.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 690aa MW: 74697.7 Da PI: 10.4629

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32	2.9e-10	15	64	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqky 47 W t+E++ll++av+++G+++W+++a +++ t+ +c+ r+ ++ PKA51073.1 15 WGTWEELLLACAVNRHGTRSWDSVAMEIQarspfsDLFTPQSCRQRYIDL 64 *****************************888887556888888888766 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MASTERSGDP ANEIWGTWEE LLLACAVNRH GTRSWDSVAM EIQARSPFSD LFTPQSCRQR 60 YIDLRRRFES NGSGIKNDAD DDSCGGDSGS PAEIPWLEEL RKLRMAELRR EVERYDASIT 120 SLQSKLKQLR AERETSEREM DLKEEEKDKD GELPDSPPGL IVRGDRMSCG DSRGSCKESN 180 STDLKVKDHK NSAGGEEADG AKTAQEADTR PAPTARPAGE VSYNGSSETL QKGAAQTAEE 240 RPPTGESGES VAGESAEVLG GKESSDVQSS ASLSRRRRGR RRKAVSGSSS IAGDAETDAV 300 SPIAACTRRT AAGSQPLASS LEIIRSSKYG SIFLRRLDSQ ESTNYRNLIR RHVDLEIVRA 360 RLERKGGAKY TSAEFFRDLL LLCNNAIVFF PKGSPESAAA VHLRDIVFKE MSTILPKRVP 420 RPPLPPAMKE SSSPPSKSVT MLKLDADLKS SLPGRKRSSG SIVACRKRSS IAAKVAAVGV 480 SEAAGKEETE GIPDSDPKVE EDDKPIIAKS KMKERSKVPA TRGFRTSKTR GSSGNRNSRN 540 SKPSSKSSFV AEENAEEVPL KSQKKVVTAP STSASKKRNV AGFLNRLKEK SSPSPTEGKL 600 LGSLKIPRGG SGGREAEQKR GTKEGRKEAA SSNQEKVTSA DSSPPAKRSV GRPPKRLAPT 660 PSPPPAKRAK EETAPSKRPP APPRRKRGRK

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MASTERSGDP ANEIWGTWEE LLLACAVNRH GTRSWDSVAM EIQARSPFSD LFTPQSCRQR  60
YIDLRRRFES NGSGIKNDAD DDSCGGDSGS PAEIPWLEEL RKLRMAELRR EVERYDASIT  120
SLQSKLKQLR AERETSEREM DLKEEEKDKD GELPDSPPGL IVRGDRMSCG DSRGSCKESN  180
STDLKVKDHK NSAGGEEADG AKTAQEADTR PAPTARPAGE VSYNGSSETL QKGAAQTAEE  240
RPPTGESGES VAGESAEVLG GKESSDVQSS ASLSRRRRGR RRKAVSGSSS IAGDAETDAV  300
SPIAACTRRT AAGSQPLASS LEIIRSSKYG SIFLRRLDSQ ESTNYRNLIR RHVDLEIVRA  360
RLERKGGAKY TSAEFFRDLL LLCNNAIVFF PKGSPESAAA VHLRDIVFKE MSTILPKRVP  420
RPPLPPAMKE SSSPPSKSVT MLKLDADLKS SLPGRKRSSG SIVACRKRSS IAAKVAAVGV  480
SEAAGKEETE GIPDSDPKVE EDDKPIIAKS KMKERSKVPA TRGFRTSKTR GSSGNRNSRN  540
SKPSSKSSFV AEENAEEVPL KSQKKVVTAP STSASKKRNV AGFLNRLKEK SSPSPTEGKL  600
LGSLKIPRGG SGGREAEQKR GTKEGRKEAA SSNQEKVTSA DSSPPAKRSV GRPPKRLAPT  660
PSPPPAKRAK EETAPSKRPP APPRRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-58	MYB_related family protein