PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51076.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 243aa    MW: 27587.4 Da    PI: 8.091
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.17.6e-3227754128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev ++ +g+lvg+kktLvfykgrap+gekt+Wv+heyrl
  PKA51076.1   2 GEREWYFFSLRDRKYPTGLRTNRATVAGYWKATGKDREVQASaTGALVGMKKTLVFYKGRAPRGEKTRWVLHEYRL 77 
                 578************************************99878899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGEREWYFFS LRDRKYPTGL RTNRATVAGY WKATGKDREV QASATGALVG MKKTLVFYKG  60
RAPRGEKTRW VLHEYRLHGE LCLRQACKEE WVICRIFHKG GGEKKISGFY HNPSCFLEPP  120
SSSLQSSFSP VQEDQSLEHS IQSLLMTQTL IHHHPLLPET LENCPLFSLP GPSQPHHFQP  180
LTNPNQEEYF TNWLEPNPQN PNPPCYELAR SHLGPAKHGE GAPILDEPMM GPCFVVRSGP  240
LVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.12e-55NAC family protein