PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51085.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SBP

Protein Properties

Length: 1061aa MW: 117533 Da PI: 7.5435

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.5	2.6e-40	169	246	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adls+ak+yhrrhkvC +hsk++++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+q+ PKA51085.1 169 MCQVDDCKADLSSAKDYHRRHKVCGFHSKTAKALVGKQMQRFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRKTQP 246 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence
MEGEVDAAVV PPIFLHHHAL PGPFREAPTL ARKRDSPWES SGLHHVHQQQ NMYRPFMEPG 60 VPNPNCWNPN WWNWDSVRFT AKPSTDAPAV ICLGTQESAA VSLDANDKIQ RSKGEENGRT 120 LLFSKETEEN EENLTLKLGG GAFVAEEPIL RPSKRVRSGS PGSSATYPMC QVDDCKADLS 180 SAKDYHRRHK VCGFHSKTAK ALVGKQMQRF CQQCSRFHPL TEFDEGKRSC RRRLAGHNRR 240 RRKTQPDDAA SHVLLPRSQD GKTFYKVRAG NIVDGPASMP SLPDKDRIMQ VLNNISSLSS 300 GTGSSKSKLQ GCLDLNVLQE APQQDASQLP SKENESPSAP STMDLLAVLS TALASTNSNE 360 LPTISQVHRD AITADVRSHI EIAHAFPLFG DSETNLNIPS QLTSSEHPVQ ISTHGIPLQL 420 FNSAEDDSPP KLGSATKYTS SESSNPIEDR SPSCSPPIAK KLFPLCSVPE KNDESLSIFR 480 EDHRTVEAST SCGWSRPLEL FKDSHRQEDN QTIQNLPYSA RYSSSSGSDQ SPSSSACHAQ 540 DRTGRIIFKL FDKDPSNLPG TLRNEILTWL AHSPSEIESY IRPGCVVLSV YICMKVTAWD 600 ELEKNFFARV SSLVKCSDSG FWRNGRFMVC TKSQLASHKD GKIRVCNSWR TLSAPVLTSI 660 FPIAVVSGQE TTLILKGRNL TVPGTKIHCT FEGGYSSKEI SGVQYPGLIY DGSSLESFIL 720 PKGSRYAYGR CFIEVENGLK GNNFPIIVAG AAICQELRTL ESEFDELQLQ SREDLLHFLN 780 ELGWLFQRIQ NYPDTSLLEF STSRFKYLLT FSVERDWSAL VRTLLDILAE RVSSSDSLAQ 840 ESIEMLLELQ LLSRAVKRKC RKMVELLVNY TVKNALTKDS THHLFPPNSK GHGGLTPLHI 900 AASMQEAEDV IDALTNDPQE IGLNSWASLL DGSGQSPSIY ASAGNHHSYN LLIARKLLDR 960 KNHQLSITIG QGMKSIGKSW LKHESTLTGT TAEKSCAQCA LADSWVKLLN HRRGLLQWLY 1020 VHPLLAIAAV CVCVCVLLRG APWVGSVALP FKWEDLEFGP K

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence

MEGEVDAAVV PPIFLHHHAL PGPFREAPTL ARKRDSPWES SGLHHVHQQQ NMYRPFMEPG  60
VPNPNCWNPN WWNWDSVRFT AKPSTDAPAV ICLGTQESAA VSLDANDKIQ RSKGEENGRT  120
LLFSKETEEN EENLTLKLGG GAFVAEEPIL RPSKRVRSGS PGSSATYPMC QVDDCKADLS  180
SAKDYHRRHK VCGFHSKTAK ALVGKQMQRF CQQCSRFHPL TEFDEGKRSC RRRLAGHNRR  240
RRKTQPDDAA SHVLLPRSQD GKTFYKVRAG NIVDGPASMP SLPDKDRIMQ VLNNISSLSS  300
GTGSSKSKLQ GCLDLNVLQE APQQDASQLP SKENESPSAP STMDLLAVLS TALASTNSNE  360
LPTISQVHRD AITADVRSHI EIAHAFPLFG DSETNLNIPS QLTSSEHPVQ ISTHGIPLQL  420
FNSAEDDSPP KLGSATKYTS SESSNPIEDR SPSCSPPIAK KLFPLCSVPE KNDESLSIFR  480
EDHRTVEAST SCGWSRPLEL FKDSHRQEDN QTIQNLPYSA RYSSSSGSDQ SPSSSACHAQ  540
DRTGRIIFKL FDKDPSNLPG TLRNEILTWL AHSPSEIESY IRPGCVVLSV YICMKVTAWD  600
ELEKNFFARV SSLVKCSDSG FWRNGRFMVC TKSQLASHKD GKIRVCNSWR TLSAPVLTSI  660
FPIAVVSGQE TTLILKGRNL TVPGTKIHCT FEGGYSSKEI SGVQYPGLIY DGSSLESFIL  720
PKGSRYAYGR CFIEVENGLK GNNFPIIVAG AAICQELRTL ESEFDELQLQ SREDLLHFLN  780
ELGWLFQRIQ NYPDTSLLEF STSRFKYLLT FSVERDWSAL VRTLLDILAE RVSSSDSLAQ  840
ESIEMLLELQ LLSRAVKRKC RKMVELLVNY TVKNALTKDS THHLFPPNSK GHGGLTPLHI  900
AASMQEAEDV IDALTNDPQE IGLNSWASLL DGSGQSPSIY ASAGNHHSYN LLIARKLLDR  960
KNHQLSITIG QGMKSIGKSW LKHESTLTGT TAEKSCAQCA LADSWVKLLN HRRGLLQWLY  1020
VHPLLAIAAV CVCVCVLLRG APWVGSVALP FKWEDLEFGP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein