PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51127.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 259aa    MW: 27997.3 Da    PI: 4.6666
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY421.9e-131041462059
                 S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   rsY+rCt++   gC++ ++v++s++dp++++itY g+H++e
  PKA51127.1 104 RRRSYFRCTHKydkGCMAARQVQKSESDPSLFVITYFGDHTCE 146
                 569*******99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGSPVAEGSS AAEGCSGTAM KELARGHESA ARLASLLLLD RGRPPPAMAG ILIDEIIGTI  60
ARAMALLESS KANQGEESPF AGATSTGLGR KGKKRQSTRK AGYRRRSYFR CTHKYDKGCM  120
AARQVQKSES DPSLFVITYF GDHTCEFAAA APCRSEQQLP AKIAAGFNES KAAGCEIKQE  180
ILCSSLPSDL KQDQNEEDDL SNLTSVDSLS DYFALQEVQM KEPSSVATSE VGIDNGDIFS  240
DYDNEYFMDF ENLVCFDPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193106KKRQSTRKAGYRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-16WRKY family protein