PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51139.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 271aa    MW: 30556.9 Da    PI: 9.4585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.8e-19113163155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++  +gr+ +eIrdp++   rkr +lg+f++aeeAa a+++a+ kl+g
  PKA51139.1 113 TKYRGVRRRQ-WGRFSSEIRDPKQ---RKRLWLGTFDSAEEAAVAYDRAAIKLKG 163
                 69*****887.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDVTVECWTP VKFSEHVFST RKAVPAAKTA VNRKILRIFS TDPDATDSSS SSEEEACEIH  60
RRQRRRRVKR HVQEIVMEVR SGATRRRRLL EPVKSPVMKS ETAAANAGSG ERTKYRGVRR  120
RQWGRFSSEI RDPKQRKRLW LGTFDSAEEA AVAYDRAAIK LKGPKAITNF PIAKIEAMLP  180
VPASLVSTTP ARFELESPAA PPPQLPSPRS VLPFPENYLC FGDVDVFGFS VAEPPLFVAD  240
TSRLPKPFWE EELDLDVFDE LSLLVVDGNE Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16166RRQRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-19ERF family protein