PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51175.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 263aa MW: 30176.5 Da PI: 8.2918

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.9e-53	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdee++++yL +k+ + ++++ +i e+ +++ePwdLp k+k +ekewyfF+++d+ky+tg r+nrat +gyWkatgkdkev+ k k+ PKA51175.1 8 LPPGFRFHPTDEEIITHYLSNKIVDPRFTA-VAIGEASFNDFEPWDLPGKAKMGEKEWYFFCRKDRKYPTGMRTNRATGAGYWKATGKDKEVFLKkKRV 105 79***********************999.67***********99999************************************985566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfy+grap+g+k++Wvmheyrl PKA51175.1 106 LVGMKKTLVFYEGRAPRGKKSNWVMHEYRL 135 7*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEDSSLCLPP GFRFHPTDEE IITHYLSNKI VDPRFTAVAI GEASFNDFEP WDLPGKAKMG 60 EKEWYFFCRK DRKYPTGMRT NRATGAGYWK ATGKDKEVFL KKKRVLVGMK KTLVFYEGRA 120 PRGKKSNWVM HEYRLLSSSP KQMKDEWVVC RVYNKKKETP LMAEKSSFED DFLVENPSLP 180 PLMDSPFLSR SSKLVNGLEM GSTSLLQKEE EEGSALWREP ILSKGFVSYS EASPLYDDDP 240 CSNGFQALAL DNLDKFGKHM HQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	8e-83	NAC family protein