PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51181.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 693aa MW: 75928.5 Da PI: 6.8613

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.2	7.6e-38	339	397	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 k+l+cprC+s++tkfCyynn++++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PKA51181.1 339 VKILPCPRCNSMDTKFCYYNNHNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 397 57899***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MADARDPAIK LFGRAIPLLD SKPPPEQPPP PTSADNVSGE VTDCLESELN DKSDVASFLA 60 SSILNAVGFI DAGANNSSFS TDSVCLLLYF GALIFQCAIL SRCIRIVIAH QDGRIRKRLW 120 IEHADAISAV AAAGDRLYSV SWDKTLKIWS TTRLRCLESV AAHEDAVNAV AVADDDTVYT 180 GSADRRIRVW AIPARAKRHE LVATLDQHRS TVHALALSSD GSLLYSGACD RAREREHNRD 240 LRPYSSIATG VAKPRSRRDK IMEFLYWLDS DITSIEINDV MLDISKDSVL HEAASVPLLN 300 NDKECNQQSS TLEDKSLAEP KSDKEAIVFE QDKVIKKPVK ILPCPRCNSM DTKFCYYNNH 360 NVNQPRHFCK NCQRYWTAGG TMRNVPVGAG RRKNKNSVFQ NRGMMFPTDM IAERKHSGLQ 420 NLGMIFPSDM TLGTFDSSDS AHHRVLPGGI SETPKCRQHS PHCESMASVE VNLHDQKGTA 480 KVICAKEDEE FASCASSTNQ HTEDDNHGDA VCSGMSGTHG NSNGGQNVHS YIGPWAYPWI 540 PPPVLAVPAF CSPFIPLNFL PSCTWGSMTS WVNGAWNVPW VVGCNGGLSP SSSTNNNEIS 600 GSGSPTLGKH PREEGLERSL WIPKTLRIDD PDEAAKSSIW STLGIKPGKD VKKGNIFKPF 660 QSSADIEGRP DVAQVLQANP AALSRSQKFQ EST

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MADARDPAIK LFGRAIPLLD SKPPPEQPPP PTSADNVSGE VTDCLESELN DKSDVASFLA  60
SSILNAVGFI DAGANNSSFS TDSVCLLLYF GALIFQCAIL SRCIRIVIAH QDGRIRKRLW  120
IEHADAISAV AAAGDRLYSV SWDKTLKIWS TTRLRCLESV AAHEDAVNAV AVADDDTVYT  180
GSADRRIRVW AIPARAKRHE LVATLDQHRS TVHALALSSD GSLLYSGACD RAREREHNRD  240
LRPYSSIATG VAKPRSRRDK IMEFLYWLDS DITSIEINDV MLDISKDSVL HEAASVPLLN  300
NDKECNQQSS TLEDKSLAEP KSDKEAIVFE QDKVIKKPVK ILPCPRCNSM DTKFCYYNNH  360
NVNQPRHFCK NCQRYWTAGG TMRNVPVGAG RRKNKNSVFQ NRGMMFPTDM IAERKHSGLQ  420
NLGMIFPSDM TLGTFDSSDS AHHRVLPGGI SETPKCRQHS PHCESMASVE VNLHDQKGTA  480
KVICAKEDEE FASCASSTNQ HTEDDNHGDA VCSGMSGTHG NSNGGQNVHS YIGPWAYPWI  540
PPPVLAVPAF CSPFIPLNFL PSCTWGSMTS WVNGAWNVPW VVGCNGGLSP SSSTNNNEIS  600
GSGSPTLGKH PREEGLERSL WIPKTLRIDD PDEAAKSSIW STLGIKPGKD VKKGNIFKPF  660
QSSADIEGRP DVAQVLQANP AALSRSQKFQ EST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	6e-63	Dof family protein