PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51302.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 172aa MW: 18514.9 Da PI: 8.8816

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F ++ L H++ H PKA51302.1 43 FPCTYCSKRFYTSQALGGHQNAH 65 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MAEKTPDYFD FMKQPPAQDP EKCPKNAPTS PVRSPASGPT RTFPCTYCSK RFYTSQALGG 60 HQNAHKKERA AAPRRIATSA PPPLLPSHST GILQSACATF SRPWIATPRA YVYFYSPPSS 120 SFSLPTDLPY PSHYPLALSP ATGASTPASA IAVRESDGVA HADLDLDLSL HL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14010.1	2e-16	C2H2 family protein