PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51327.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SBP

Protein Properties

Length: 336aa MW: 35910.3 Da PI: 8.8523

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.1	1.1e-42	69	144	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+ dl+ ak y+ rhkvC vhsk+p+v+v+gleqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+ PKA51327.1 69 RCQVEGCNLDLTGAKAYYCRHKVCGVHSKSPKVIVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRKP 144 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MEKGSSCATS GCGDSFNGLK FGKKIYFEDV GGGGASSKSM VSPAPSDAPP AGKKGKAVAQ 60 GGGQLKPPRC QVEGCNLDLT GAKAYYCRHK VCGVHSKSPK VIVAGLEQRF CQQCSRFHLL 120 PEFDQGKRSC RRRLAGHNER RRKPPPGPLS SRYGRLSSFH EDNSRYRSFL MDFNCPRPAA 180 PAARDVLPNN TNLWQGSNPY PPIFSASELA PGDCLAGVSD SGSCALSLLS TQPWAASTAT 240 AAVPGNHSPV VAARASAYSG SSMAQMNIGS SYMNCPWGFK DNAPGSSSQM GLRHIVDDNG 300 HYSSELELAL QGNRQCLHEL GSSQVYDNHH AMHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	6e-54	SBP family protein