PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51378.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 329aa    MW: 35241.1 Da    PI: 10.4843
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.35e-31258315359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYe+eH+h+
  PKA51378.1 258 DEYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYEDEHRHS 315
                 9*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGAVDLLGYA KMDDQISIQE AAAAGIRSME KLIFQLNRYH HHQKSSSSAT IDCREIADHT  60
VSKFKKMISI LNRTGHARFR RGPAVAISAV PPQPAAPAPP SAAAPAPVIH KQSLTLDFTK  120
PSSVAGASNN LAVASAAKGA YIKESFSIST PISSANSSFM SSITGDGSVS NGRQGGGSSL  180
LLPPAPALSA GGVITGKPPL SSAFNKKRCH SHAHSEDVAG KFVASGGRCH CSKRRKNRVK  240
RTIRVPAISS KIADIPPDEY SWRKYGQKPI KGSPYPRGYY KCSSLRGCPA RKHVERAPDD  300
PSMLIVTYED EHRHSQPSDP LVFDSHRQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.19e-98WRKY family protein