PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51572.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 245aa MW: 28591.1 Da PI: 6.5125

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.7	6e-36	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+++ed+ +++++sw e+ +sfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++i+ PKA51572.1 21 FLTKTYQLVEDPCTDHIVSWGEDYTSFVVWKPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANDFFRKGEKQLLSEIQ 108 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+ks PKA51572.1 109 RRKS 112 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAFLVEFSES SSHKAVLPAP FLTKTYQLVE DPCTDHIVSW GEDYTSFVVW KPPEFARDLL 60 PKYFKHNNFS SFVRQLNTYG FRKIVADRWE FANDFFRKGE KQLLSEIQRR KSPQIPQQYY 120 HHHQYYFPYC PEEIAGRGDA GFLSALSEDN QRLRRRNSLL TSELTHMKKL YGDIIHFLQQ 180 YHVSSSHGER SVRLIEMAPS GHHQPRCSVA VKEEKEEEED EEEEEEEASG TVKLFGVPLP 240 SGKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-73	HSF family protein