PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51675.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HSF
Protein Properties Length: 266aa    MW: 29172 Da    PI: 5.7896
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1041.3e-32161072102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F+ k+y +++d++++ +isw +++nsfvvld+ +f +++Lp +Fkh nf+SFvRQLn+YgF+kv+ ++         weF+h  F +g+++ll++i 
    PKA51675.1  16 FVVKTYGMVNDPATDAVISWGRENNSFVVLDPFSFCQSLLPAHFKHCNFSSFVRQLNTYGFRKVDPDR---------WEFAHALFLRGQTHLLRNIV 103
                   9********************999*****************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
    PKA51675.1 104 RRNN 107
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MESGGGGGEE MVGAPFVVKT YGMVNDPATD AVISWGRENN SFVVLDPFSF CQSLLPAHFK  60
HCNFSSFVRQ LNTYGFRKVD PDRWEFAHAL FLRGQTHLLR NIVRRNNGGG GRRKGGGEEE  120
EDDEAVAVEV VRLKKEQRAI DERVDRMMLR LQETERRPRQ MLAFLLKVVA DPQVLGRLMA  180
RAGVEEGEVV GREKKRARLR LGLEGAPPAA ATGEWVPAAD AGDAAELFGV DDFSPVAGFA  240
GGLETMDAVG GYAYPFPVNN GFKLSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108117GGGGRRKGGG
2109118GGGGRRKGGG
3110119GGGGRRKGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-58HSF family protein