PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51738.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 302aa    MW: 33404.2 Da    PI: 9.0904
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.81.3e-5081321128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeelv++yL++k++  ++ +  +i+e+d+yk++Pw Lp + + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk+v +   + 
  PKA51738.1   8 LPPGFRFHPTDEELVMHYLCRKCAVLPIAV-PIIAEIDLYKYDPWLLPGMSTYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGT--PRP 103
                 79*************************999.88***************76677899************************************99..779 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  g+kk Lvfy g+apkgekt+W+mheyrl
  PKA51738.1 104 LGIKKALVFYAGKAPKGEKTNWIMHEYRL 132
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MNGVDLKLPP GFRFHPTDEE LVMHYLCRKC AVLPIAVPII AEIDLYKYDP WLLPGMSTYG  60
EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPVGT PRPLGIKKAL VFYAGKAPKG  120
EKTNWIMHEY RLADVDRSVR RKNGLRLDDW VLCRIYNKKG PAEKPRIGLG PKAEIGPVGL  180
GTLSPPETPE RKPAPVSWQV PVVAPAARPP QPGSRGRWST ESMPSLHHAE SSGSEHVLSP  240
EFTCEAESQP RWGFSWEKTA LDAPLNNGNA TVGCGSGVAA DFLSELGSDP LQDILMFLQK  300
PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-119NAC family protein