PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51769.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 727aa MW: 83097.9 Da PI: 6.9779

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.4e-22	56	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+ vGFsvrk k+++ ++ i+ ++f Csk g++e+e ++ ++ + e+rtgCka++k + + +gkw+v++l+ eHnH+la PKA51769.1 56 LYCDYAHYVGFSVRKGKNTYFLGTKDIKAKEFLCSKAGFKEDEPDA----SHCKLESRTGCKAMVKFQVDGNGKWRVSRLVAEHNHDLA 140 7***************************************9988....89999******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MGESQQPGLK AGRSDIDLEK GGESEAVSSS DFLQFEEGKR DLLGQIVDSE IEAYKLYCDY 60 AHYVGFSVRK GKNTYFLGTK DIKAKEFLCS KAGFKEDEPD ASHCKLESRT GCKAMVKFQV 120 DGNGKWRVSR LVAEHNHDLA KPEERHLLRS ARSVTASKMT SVFRTLLGAG IKTTKVSAYL 180 FDEGTGIENM KFSKKEGQEL INSQNLTEVE PGDSQSLVNL FKERAAQDAM FFWDIQLDKE 240 GKLTNFFWRD GRSRIDYDCF GDVVIFDTTY RLNKYVCAPF LGINNHGQTI TFGVAFLMDE 300 TTESFVWLFN TFLKSMGDRQ PITIFTNLHE AMDKAVEMAF STSHHRFCVW HISKNAPTHV 360 HNFNSDKELK VLFTKCMQEC DSEIEFEETW RNMLAKGNLD SHEWLRYLYG SRRKWSTAFN 420 KDNFDLGIKS TLRTGINNNV LNIIPNTSSL TQCFIQVEKL LHGWRQSEAN EDFNCNQSTP 480 ACAIKHSPIL RHASQVYTNK MYKLFEREFL DGLGGLSFEE FPCGGGSLCQ FKMKMHDEGE 540 KEWVVNFDSF TMEVECNCKK FRSMGILCLH ALKAFSLKNI ARIPDKYIMK RWTKEARKGI 600 YNLGQSEQSQ PENMESDFVY LNHVSRYCYD LATRSQQHLG ARKILINALE TAERNLEVFF 660 SEQCFSDANS EKRLKKSRKE NDSGNQFSLG DAARNVSPSG TNSVVLPHYW SIMGPFDDGS 720 LPQPHSF

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MGESQQPGLK AGRSDIDLEK GGESEAVSSS DFLQFEEGKR DLLGQIVDSE IEAYKLYCDY  60
AHYVGFSVRK GKNTYFLGTK DIKAKEFLCS KAGFKEDEPD ASHCKLESRT GCKAMVKFQV  120
DGNGKWRVSR LVAEHNHDLA KPEERHLLRS ARSVTASKMT SVFRTLLGAG IKTTKVSAYL  180
FDEGTGIENM KFSKKEGQEL INSQNLTEVE PGDSQSLVNL FKERAAQDAM FFWDIQLDKE  240
GKLTNFFWRD GRSRIDYDCF GDVVIFDTTY RLNKYVCAPF LGINNHGQTI TFGVAFLMDE  300
TTESFVWLFN TFLKSMGDRQ PITIFTNLHE AMDKAVEMAF STSHHRFCVW HISKNAPTHV  360
HNFNSDKELK VLFTKCMQEC DSEIEFEETW RNMLAKGNLD SHEWLRYLYG SRRKWSTAFN  420
KDNFDLGIKS TLRTGINNNV LNIIPNTSSL TQCFIQVEKL LHGWRQSEAN EDFNCNQSTP  480
ACAIKHSPIL RHASQVYTNK MYKLFEREFL DGLGGLSFEE FPCGGGSLCQ FKMKMHDEGE  540
KEWVVNFDSF TMEVECNCKK FRSMGILCLH ALKAFSLKNI ARIPDKYIMK RWTKEARKGI  600
YNLGQSEQSQ PENMESDFVY LNHVSRYCYD LATRSQQHLG ARKILINALE TAERNLEVFF  660
SEQCFSDANS EKRLKKSRKE NDSGNQFSLG DAARNVSPSG TNSVVLPHYW SIMGPFDDGS  720
LPQPHSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein