PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51849.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 252aa    MW: 27484.9 Da    PI: 7.898
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.82.9e-20136199358
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.....SSTTEEEEEEES--SS CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.....edpkvveitYegeHnh 58 
                 Dg++WrKYGqK+++ s +prsYY+Ct+    gCp++k v++ +     +dp  +++tY+ +H +
  PKA51849.1 136 DGHQWRKYGQKHIHRSGYPRSYYKCTHWkeqGCPATKTVQQRDaaagdSDPPRFDVTYSMQHSC 199
                 9*************************977789*******9864233336999**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MADTHKSPPT AHLLLPKLSL CQPSSSSSPK MRSLPYSASA GAAADHLRLG YERMTQLRAF  60
LLSSSTLASP RMALGVDLVD KALRCCAAAI SELQTTTPAA DGDGHNALPD DGSSKRRKRR  120
KKIQSWSMVT SVPHFDGHQW RKYGQKHIHR SGYPRSYYKC THWKEQGCPA TKTVQQRDAA  180
AGDSDPPRFD VTYSMQHSCI STERTAAPFV MDSSAAADDG MLGAELAGDP TPSPLEDLEF  240
DWDLMAVIDG VH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115121KRRKRRK
2116122KRRKRRK
3118146KRRKKIQSWSMVTSVPHFDGHQWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-18WRKY family protein