PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51875.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 460aa MW: 50209.4 Da PI: 9.0699

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.6e-33	164	221	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgs++pr+YY+Ct+++Cp+kkkver++ d++v+ei+Y+g+Hnh+k PKA51875.1 164 DDGYNWRKYGQKQVKGSQNPRNYYKCTHPSCPMKKKVERAS-DGQVMEIIYKGKHNHPK 221 8**************************************.*************85 PP
2	WRKY	104.6	5.4e-33	308	366	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver++ d + v +tYeg+Hnh PKA51875.1 308 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASGDLRSVMTTYEGKHNHA 366 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MYSSRESLPG SANSIPAAFT FSSACPSESS FFKTASMADG SDRPQPAARH RLLPLDHSMN 60 TSGAAKSSIP QGFPISPSSF LSPSELLNSP SFLSSNIMAS PTAGCFPTHA FNWKNSNSHH 120 DFSFFNPSFA GQVKEDSALQ ANTDHDQSDL IRSALTTRYR GGSDDGYNWR KYGQKQVKGS 180 QNPRNYYKCT HPSCPMKKKV ERASDGQVME IIYKGKHNHP KPVRTRRSSS SMFSSMLFPR 240 ETDSSASVGV DDDLGLKSAR GDDGDHEDHF DLLNKWKNDD DEEERISDSR TTKEPKVVVQ 300 TTSDVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTTAGCP VRKHVERASG DLRSVMTTYE 360 GKHNHAVPAP RRTATAGSLM TMMNSPLVID GGGGGGGGSG AASSSSTNTN MIFCNFGAPS 420 SAVNAISSSF GLISKSYEYP VAASFDRSGR HYSKQHQHQQ

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MYSSRESLPG SANSIPAAFT FSSACPSESS FFKTASMADG SDRPQPAARH RLLPLDHSMN  60
TSGAAKSSIP QGFPISPSSF LSPSELLNSP SFLSSNIMAS PTAGCFPTHA FNWKNSNSHH  120
DFSFFNPSFA GQVKEDSALQ ANTDHDQSDL IRSALTTRYR GGSDDGYNWR KYGQKQVKGS  180
QNPRNYYKCT HPSCPMKKKV ERASDGQVME IIYKGKHNHP KPVRTRRSSS SMFSSMLFPR  240
ETDSSASVGV DDDLGLKSAR GDDGDHEDHF DLLNKWKNDD DEEERISDSR TTKEPKVVVQ  300
TTSDVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTTAGCP VRKHVERASG DLRSVMTTYE  360
GKHNHAVPAP RRTATAGSLM TMMNSPLVID GGGGGGGGSG AASSSSTNTN MIFCNFGAPS  420
SAVNAISSSF GLISKSYEYP VAASFDRSGR HYSKQHQHQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.1	6e-81	WRKY family protein