PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51903.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YB
Protein Properties Length: 170aa    MW: 19205.2 Da    PI: 8.9011
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.47.4e-5725117193
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy+eplk+yl+kyre+
  PKA51903.1  25 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREV 117
                 69*****************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MAAEAAGSPH GGSLESGEQS PKSNVREQDR FLPIANISRI MKKALPANGK IAKDAKETVQ  60
ECVSEFISFI TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIEPLKLY LQKYREVVIL  120
NLSYKWLGNQ RNFWFCSCIL MYLIVILSPF VFLWRFLSNG RGIASDGGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-66NF-YB family protein