PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52008.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 369aa    MW: 40714.7 Da    PI: 5.01
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-17131171345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       WT+eE+  lvda+ + G++ W+ Ia++++ gRt++++k++w+
       PKA52008.1 131 IWTEEEERMLVDAHMEIGNK-WAEIAKRIP-GRTENSIKNHWN 171
                      6*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MTAGHANHRL LRRAPLVIPL EEFLRSSQHP MRTEEMISSS AGSGAARASV LAPSSGLMDE  60
SFCFSVNAGE DEVGRLKEGK RINGRSSPST SSLGRNGSVV KGQWSAEEDS MLIRLNVQLI  120
SPSQAFMQKD IWTEEEERML VDAHMEIGNK WAEIAKRIPG RTENSIKNHW NATKRKQISK  180
RNLRRKAPHV EGMTTTISQK LSVLQNYIKR FTHKEEDAST AVAASSSSHS SPSNGSQEAV  240
LVEPLDDAVL LLPSNNDTEI ATEMVEELLL TEEPAILTSG FYDIAQFLIV DENLCYSYGG  300
GRRSPHAMDV FISNILGGPP VTAMDEEWEL SGDKEEGEVD LGSSVRCGEG DMDLMEMLNW  360
HLSGSQRRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.11e-30MYB family protein