PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52052.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 226aa    MW: 25411.9 Da    PI: 6.1772
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.4e-15114158347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++++  ++G g+W++I+r++  +Rt+ q+ s+ qk+
       PKA52052.1 114 AWTEEEHRLFLQGLDKYGRGDWRSISRHFVVTRTPTQVASHAQKF 158
                      6******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MENASSGCSW SWDEEKAFEN ALHVYSDDCN RRWESIAAVV GKNVEEVVYH YHLLEQDLDA  60
IESDLVPTPI YSSSSVTMDE SANDGEDSRN NEHGSGQERG KGSRSEQERR RGIAWTEEEH  120
RLFLQGLDKY GRGDWRSISR HFVVTRTPTQ VASHAQKFFI RMNSRNRERR RSSIHDIMTP  180
GHGHVPVTAA MSSSSEPLLP LADPGKLGTG TGQTVNVPLG SFQIRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-58MYB family protein