PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52154.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YC
Protein Properties Length: 125aa    MW: 13438.5 Da    PI: 6.7821
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC91.96e-29181011999
       NF-YC  19 helPlarikkilk...adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                 h+lPl+rikki++   +d +  mi+ eaP ++skace+fi elt r++  +   +rrtl+k dia+a+t td fdfl+ +vp++
  PKA52154.1  18 HSLPLSRIKKIMRhsgSDSKAMMIAGEAPLVFSKACEIFIQELTARAYEITVLGRRRTLQKDDIATAITVTDLFDFLLQVVPES 101
                 99**********9444588999***********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MRQAGIYSGI LSHRTGPHSL PLSRIKKIMR HSGSDSKAMM IAGEAPLVFS KACEIFIQEL  60
TARAYEITVL GRRRTLQKDD IATAITVTDL FDFLLQVVPE SADAGDGAAP AAGGRPIDDA  120
CELLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-29NF-YC family protein