PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52209.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ZF-HD
Protein Properties Length: 174aa    MW: 18902.3 Da    PI: 8.0693
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer55.21.6e-17659258
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGg..havDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 e+++Y +C++N A +l +  +++DGCgEf ++ g    a ++ C ACgCHR+FHR+ ve
   PKA52209.1  6 ERIVYANCMRNLATNLPAvyYTTDGCGEFHED-G----AGGMLCGACGCHRSFHRKVVE 59
                 5789***********98755799******998.3....569***************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEDARERIVY ANCMRNLATN LPAVYYTTDG CGEFHEDGAG GMLCGACGCH RSFHRKVVEE  60
LPAVGGAAEC GRRLRRPRTR FTGQQKARLE AFAQKLGWRM PGADGQGDDE VERFCRENGI  120
GRRVFRTWLH NHKATHAVVP AVSAAITVPS VSPESGPGDG SIGAAADREE TAMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.19e-14ZF-HD family protein