PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52379.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 330aa    MW: 36275.5 Da    PI: 8.306
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.25.6e-33189245158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rakle+++k+ +ksrkpylheSRh hA++R Rg+gGrF
  PKA52379.1 189 EEPVYVNAKQYHAILRRRQHRAKLESQNKI-SKSRKPYLHESRHLHAMKRVRGTGGRF 245
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSDKDSHQGL SQSTCNYASN CLPWWNPGGP HIVLYPCTNI LYANPNLKGS NAIKQVGQQM  60
IEHESSSSQS TEHSREVSAK NEDDINENSI SARAGLARDG VNKKGDEHLH EKLAEGQTKP  120
VLSTGNFGVI FAPPKFACSQ SLNYIPYAYS DSQYAGVMAA YASHPAIHPQ MVCMPPGSRV  180
ALPPDPAGEE PVYVNAKQYH AILRRRQHRA KLESQNKISK SRKPYLHESR HLHAMKRVRG  240
TGGRFLNTKN LQEDETHLST IATHRHVSLM GSFDENTLHT GNCGTANSSV TPACSEITSV  300
SISDHLGFIS SELQSHLFNN GNQLRVPVTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-39NF-YA family protein