PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52430.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 352aa    MW: 38114.9 Da    PI: 7.4277
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-12285330655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + +++L +AveYIk+Lq
  PKA52430.1 285 SIAERERRTRISKRLRKLQELVPNM----DKQTNTSDMLDLAVEYIKELQ 330
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MSRLVPSSKK PPLAAAVVRQ AGLARYGSAP GSLLSSIAES VIGGGDGSSG EFLAAGASDA  60
VAERFFGGDS PCLTSESSCR VASAAAAASP PDLERSIRRV ECGRGMFPQE YGGFREFAGG  120
SHLIRHSSSP AGFFADLLME SGLSQPKGVG NCSQMAGKRL SSQWSFSQQD SLSQISETTI  180
ADMAESIIHG NKGNEAAGNL ESSFNRVPFC SWDDTHSIVF NSAPHKRAKD NNEDTIATYS  240
NLDPQLSLPC TSLEMEAVEK YLQVQQDIVH CKLRAKRGCA THPRSIAERE RRTRISKRLR  300
KLQELVPNMD KQTNTSDMLD LAVEYIKELQ SQIKKLNQEH AECTCIIKLE RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.15e-63bHLH family protein