PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52473.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family LBD
Protein Properties Length: 100aa    MW: 10592.3 Da    PI: 8.7728
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.19.4e-361098188
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
                +C aCk+lrrkCa+ C++ap+f  +q +++f ++hk+FGasnv+kll++lpe +r++a+ +++yeA ar+rdPvyG+v+++ +lqq+++
  PKA52473.1 10 SCGACKFLRRKCADLCIFAPHFSYDQaAAHFSAIHKVFGASNVSKLLAHLPERHRPAAAVTVAYEAVARIRDPVYGCVAHVIALQQEVA 98
                6***********************9978**********************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MAGIAGATSS CGACKFLRRK CADLCIFAPH FSYDQAAAHF SAIHKVFGAS NVSKLLAHLP  60
ERHRPAAAVT VAYEAVARIR DPVYGCVAHV IALQQEVAGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.19e-39LBD family protein