PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA52499.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 137aa MW: 16135.3 Da PI: 11.078

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA52499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.7	5.6e-20	17	77	1	56
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++ R+++t +q+++L elF r+ps+e++++++++l +++ ++V++WFqN++a+e+ PKA52499.1 17 KCGRWNPTLQQVKVLTELFSAgLRTPSTEQIQKISRHLssfgKIESKNVFYWFQNHKARER 77 568***************99***********************************98 PP
2	Wus_type_Homeobox	107.3	9e-35	17	79	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++ RW+Pt +Q+k+L+el+++GlrtP++e+iq+i+++L+++Gkie+kNVfyWFQN+kaRer + PKA52499.1 17 KCGRWNPTLQQVKVLTELFSAGLRTPSTEQIQKISRHLSSFGKIESKNVFYWFQNHKARERLH 79 578*********************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence
MEESLGLMCS SSSSSSKCGR WNPTLQQVKV LTELFSAGLR TPSTEQIQKI SRHLSSFGKI 60 ESKNVFYWFQ NHKARERLHQ YNANDLIKKR RRQQLHHPPH HHHHHQPILN LFLNLDVNRS 120 INYRKRPQTQ FPPPGTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	2e-34	WOX family protein