PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52551.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 260aa    MW: 28648.9 Da    PI: 7.6697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-11142189455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  PKA52551.1 142 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 189
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDPSSLITRG NVPEMWQFPM IGVPSPVRVP AGRMGHRDAS VVESSVTEQR GGNRSRKKRR  60
DAGPPAASED DSSKLVSTSS GGNDLTDNEA KCMKVGKSQD ENTDSRVHNE ASSGANKLDD  120
PPEPPKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK VIGKASVLDE  180
IINYIQALQR QVEFLSMKLE AVNSRINSNI EGFPTKDFGV QTYQTHSSLA FASQPTREYE  240
QGSAAEWLHM QVGGAFERVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-79bHLH family protein