PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52569.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 244aa    MW: 25737 Da    PI: 10.1535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.5e-203584255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  PKA52569.1 35 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 84
                58*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAPREKGSGG GRGAGGAGLE LAISSGGRGN GQEMHFRGVR KRPWGRYAAE IRDPGKKSRV  60
WLGTFDTAEE AARAYDAAAR EFRGSKAKTN FPFTDGYLQS ASPKLAAAGG KAASCSPSSQ  120
SSTVESSSRE IAVAVAVPPM ATPLPPLDLD LIHRGTPRYP FQHFQPGVPA MAQPFFFFGA  180
FGRSEKGAAM SLAGHHRRLA LDLPSGVQSD SDSSSVVDLQ PPSPQAKLRP LDLDLNLPPQ  240
AEIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-23ERF family protein