PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA52578.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SBP

Protein Properties

Length: 175aa MW: 19456.7 Da PI: 10.0144

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA52578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.6	7.2e-43	63	140	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+adl+eak+yhrrhkvCe+h+ka+vv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ PKA52578.1 63 VCQAEKCTADLTEAKRYHRRHKVCEAHAKAAVVIVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKSSS 140 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MERTPGEPRR SAGEKGLAAA VDEGIEVDGE EEAEERRVRP THPSRQTPPA RGRATGGGAA 60 GPVCQAEKCT ADLTEAKRYH RRHKVCEAHA KAAVVIVAGL RQRFCQQCSR FHELSEFDET 120 KRSCRRRLAG HNERRRKSSS ESQGEGSGRC MQANQGPKIQ ISLPGNQNYK HFQIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	4e-37	SBP family protein