PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52597.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 72aa    MW: 8273.25 Da    PI: 7.5301
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.8e-112565345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++E++l+v+  ++ Gg+ W++Ia +++ gRt++++  +w 
       PKA52597.1 25 KFREDEEDLIVRIYNLIGGR-WSLIAGRIP-GRTAEEIEKYWK 65
                     5789****************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MNQTSEVVNV GSRASKVNHE EFQAKFREDE EDLIVRIYNL IGGRWSLIAG RIPGRTAEEI  60
EKYWKSKYAN SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.13e-18MYB_related family protein