PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52730.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 200aa    MW: 21723.4 Da    PI: 9.5567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-204998255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                gy+GVr+++ +g+W+AeIrdp +     r++lg+f taeeAa+a+++ +++++g
  PKA52730.1 49 GYRGVRRRP-WGKWAAEIRDPAK---GVRVWLGTFATAEEAAQAYDREARRIRG 98
                8********.**********843...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MCGGAAIADF IPRRRGNSDN PVSASDLWPH SSLSRKLELG KRKRASKNGY RGVRRRPWGK  60
WAAEIRDPAK GVRVWLGTFA TAEEAAQAYD REARRIRGPK AKVNFPNEDP PPPAPPPPPS  120
SLSENHRQVA DGTGHGACGG TYRSCLTPFQ QTPDVDEIVP PAVAAAPAAG TEYWSGINRE  180
TPAAAAMEIL WNFDDLPLTF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14157KRKRASKNGYRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-34ERF family protein