PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52882.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 291aa    MW: 31163.8 Da    PI: 6.2393
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.2e-16211248136
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                 C++Cg +   Tp++Rrgpdg++tLCnaCGl ++ kg++
  PKA52882.1 211 CHHCGISAksTPMMRRGPDGPRTLCNACGLVWANKGTM 248
                 ****977777*************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MPLPGQIDDG DVGVASDGNG MTQHAGEHDE NDGGGSAVHA GMVEGEEGVM EGEEMEGDGP  60
SDPGHMVDPQ GMIAPHGGSN QLTLSFQGEV YVFDSVSPEK VRAVLLLLGG REVTDSFTAF  120
PSASTMSIKR SNLPHRVASL MRFREKRKER NFDKKIRYTV RKEVALRMQR SRGQFISSKS  180
KPDDATSGIT TWDSNQHWGS VEKQATSAAE CHHCGISAKS TPMMRRGPDG PRTLCNACGL  240
VWANKGTMRD LSKNLSAPTQ NAFAEAKELN DSTGAAAMNL VSVPANCQVS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-81GATA family protein