PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52902.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 553aa    MW: 59016.8 Da    PI: 7.4098
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.75.5e-29221277259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK+vk++e +rsYYrCt a+C++kkkver+  d+kv+e+ Y+g+Hnhe
  PKA52902.1 221 DDGYNWRKYGQKQVKSTERARSYYRCTNADCSAKKKVERCP-DGKVTEVQYRGQHNHE 277
                 8****************************************.***************8 PP
2WRKY105.72.5e-33390448159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK vkg+++prsYYrCt+ gCpv+k+vers++d k ++itYeg+Hnh+
  PKA52902.1 390 VNDGYKWRKYGQKIVKGNPNPRSYYRCTHDGCPVRKHVERSTDDVKSFVITYEGQHNHD 448
                 58********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    
MAEGETPGGE RAGAAGRNIA IPVQAPAVEV KAESLARSDR QAGGPSGSVK PVSETLVGTK  60
PSASLPPIAV SGASASGDCR SFSQLLAGAM ASPAGSSGSS PILAVPVDAV RLPVVAVPCF  120
LAPAALLESR GFTGQFAMTH QAVLATVTAQ AQMQLQAGYP SPSGTLPSSF QQVLSPVSSP  180
VPHPKMLPAP EENACSQESE QTPSTDQKSQ STHAFMKNSS DDGYNWRKYG QKQVKSTERA  240
RSYYRCTNAD CSAKKKVERC PDGKVTEVQY RGQHNHEPSR KPKLPKERGI QSCGSYGVAE  300
QLDVPCIESR ESYPSTSKVE QNSGNETSEQ QLYCSSDCEG DMGIKAEEDL CDEPEPKRRI  360
SENTVTNLVS PLKAVKEPKS VVQTAAVGHV NDGYKWRKYG QKIVKGNPNP RSYYRCTHDG  420
CPVRKHVERS TDDVKSFVIT YEGQHNHDLP SLKIGTDPPS ISVIAADKSN KSDCFRDKRT  480
SSNSPLDVKK HSSGKKAMEI VGEKALESAQ TLLSMGCSPS TSGEEEEEGS ANSDGMKSPL  540
FNEKSAPVPV QNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-67WRKY family protein