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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PKA52998.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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| Family | bZIP | ||||||||
| Protein Properties | Length: 170aa MW: 19229.5 Da PI: 8.7383 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 40.4 | 6.6e-13 | 62 | 118 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
e +r rr+++NRe+ArrsR RK+ ++eL+ v+ L a N++L +el++ + +
PKA52998.1 62 EERRRRRMISNRESARRSRMRKQRHLDELASQVARLRAANRRLLDELNKVMRDREDM 118
66899******************************************9998877766 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 170 aa Download sequence |
MHLGQVAGIQ LHFAASQAAV PAACHYGGFF PGPYSLPLPN PYFPSYSASE DAGEDPGQTA 60 AEERRRRRMI SNRESARRSR MRKQRHLDEL ASQVARLRAA NRRLLDELNK VMRDREDMVL 120 ENARLRGEED DLQNRLTALH ADQEDDSRRP PCVVAAAHLR NRGRMSGDLE |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 77 | 84 | RRSRMRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G13600.1 | 2e-10 | bZIP family protein | ||||




