PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53205.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YC
Protein Properties Length: 129aa    MW: 13886.8 Da    PI: 9.7126
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC91.11e-28191081698
       NF-YC  16 fk.nhelPlarikkilk.....adedvkmisaeaPvllskacelfileltlrswlhae.enkrrtlkksdiaaavtrtdifdflvdivpr 98 
                 +k +h+lPl+rikki+k     ad+   mis eaP+++sk celfi elt rsw  a    krrtl + d+aaav+ td fdflv +v  
  PKA53205.1  19 MKgQHALPLTRIKKIMKrsggqADQGKMMISVEAPIVFSKVCELFIEELTRRSWASAAaYGKRRTLVREDVAAAVEATDNFDFLVSVVSS 108
                 5559************955555588899**************************9875168************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MRRPGIYSGV FTGGDASGMK GQHALPLTRI KKIMKRSGGQ ADQGKMMISV EAPIVFSKVC  60
ELFIEELTRR SWASAAAYGK RRTLVREDVA AAVEATDNFD FLVSVVSSSR RAAAGRSADD  120
DSDGVVMDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.11e-24NF-YC family protein