PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53222.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 280aa MW: 30125.8 Da PI: 8.4845

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	106.2	1.8e-33	88	144	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l cprC+s+ntkfCyynnys sqPr+fC+aCrr+Wt+GG+lrnvP Gggr++++ PKA53222.1 88 TPLICPRCQSNNTKFCYYNNYSRSQPRHFCRACRRHWTAGGTLRNVPFGGGRKNKRP 144 5678**********************************************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MKDSSKKKVV LAFLPKSDIC PILCPEYQQS SNRPFSSSSS CSPIVRSAMG ITSKLVANGA 60 AGLNWQQTGG LEISSRLPEA GGESAKTTPL ICPRCQSNNT KFCYYNNYSR SQPRHFCRAC 120 RRHWTAGGTL RNVPFGGGRK NKRPKTAAGD ASATGSAEPP LFPKLDGPTV FFDILRQVFI 180 HPPPPLPPAS EMLNSGGECG ILNSGFRFSE FLPTATSSSS SSGFNFLGDD VVGAGGEEGM 240 PGITDRSPAN SWFQEPPSFP ASYWDFWDGN IDLRQPTSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	1e-25	Dof family protein