PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53224.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 403aa    MW: 44661.4 Da    PI: 5.2183
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-13217260654
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + Er+RR ++N++f+ Lr+l+P++     +K++ a+++  A++YIk+L
  PKA53224.1 217 FATERQRRVQLNEKFDALRSLIPTP-----TKVDRASVVSDAIDYIKEL 260
                 689**********************.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MARSQRETEI MFDESSFFNI SPNVNPIPHP LTNISNGNSN DVCLIEGEIP SFNLESHHQL  60
SFDVDLHDII EAPPPSGATA ASWDSGYPCD NHQALHQQAP PQEPVLPVYL PSGMVPELLN  120
LLELPQCRVG SAALPSFDGG GSMVYDEPMH LRGYAAAPAS RGGVRELLGS LPAANYGIFC  180
GFGEREGDGE GEFHNGGLLE YEKGDVVVKG TAVKGNFATE RQRRVQLNEK FDALRSLIPT  240
PTKVDRASVV SDAIDYIKEL LRTVDELKLL VEKKRRARER SKLRKEEEDQ IAGDMESSSM  300
GRLIKEENDE TRAAVNGHLR CSWLQRRSKE TFVDVRIIDD EVNVKLTQKK KANALLFAAK  360
AMEELQLDLL HVAGGNIGDY HIFFFNSKVG NYTRSHSVFL ISC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.13e-50bHLH family protein