PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53231.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 398aa    MW: 42908.7 Da    PI: 5.1797
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986.1e-31184242259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  PKA53231.1 184 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 242
                 699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCDCFWQRME NGQGDLADIV KASGLAGPPD HFPDFPSSAA TSAASGSAWH FSPDPTPLFP  60
ANAFGDPFAD VQDPLLHELA AGTGFFDSPE APPPPEGKRS SSSLFSRMLQ ISPGKSLAPP  120
MIGPQQAPVI VAAGDSPVDG GAGLLISSPR TTGIKRRKSQ AKKVVCIPAP AAGNGRPSGE  180
AVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN  240
HPWPTQRNAL AGSTRSQPSK PAISNTSSSS SSSSCKITPH CSQKKPISSI KEEEDEGSKE  300
NCASSSSTKQ AVKEELAFQP DDFFADLAEL ETDPMNLIFP AKFMGDKLIN VERENTSKGM  360
DPFNNLFDWG GEMINSFGEE EEEEEEQQQQ GEDHKRGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-79WRKY family protein